It was interesting swapping in an early 3rd gen 4Runner axle under my '01 4Runner. I did a decent bit of prep work and still found an unexpected issue on the early gen axle. The early 3rd gen 4R axles use a single brake line from the master cylinder to the axle and then it splits to the two drums. The later 4Runners have a single line to each drum from the master cylinder so I ditched the brake line that came with the axle. Because of the difference in the brake lines the locker axle was missing a bolt hole that is for the brake line holder on the driver side. I bent the locating tab and let it rest for the time being. I plan to tap it for the bolt when I get a chance.
Just a few notes on the axle swap for future reference if anyone needs it:
1. Dropping the spare tire is not optional.
2. Remove everything that is attached with the 12mm and 10mm bolts before any of the big parts. I removed the emergency brake first, then the ABS sensors, and finally the brake lines. I put some needle nose vise grips on the brake hoses to keep the the dripping to a minimum.
3. Remove the big parts in this order: driveshaft, sway bar, shocks, panhard bar, upper control arms, and then lower control arms. Reconnect the new axle in the exact opposite order.
Pic of missing bolt hole on the upper control arm bracket.